Week 1: Unix environment

• Click to download the slides (pdf)

Week 2: Cluster and genomic resources

• Click to download the slides (pdf)
• Click to download the exercises (pdf)

Week 3: RNA-Seq data processing

• Click to download the slides (pdf)
• Click to access the exercises

Week 4: The DolphinNext environment/IGV/UCSC genome browser

• Click to download the slides (pdf)
• Click to download the summary slides (pdf)
• Click to download the DolphinNext slides (pdf)

Week 5: RNA-Seq data processing/analysis using Galaxy and Dolphin

• Click DolphinNext Quick Start Guide
• Click to see R scripts(html)

Week 6: RNA-Seq data analysis using R and DEBrowser

• R Tutorials:
  http://www.cookbook-r.com/
  https://www.rstudio.com/online-learning/#r-programming
  ggplot2 tutorials
  
• DEBrowser Documentation
• DEBrowser Bioconductor Link
• Click to download used R commands