Six weeks sequence analysis bootcamp:

Week 1: Unix environment

  • Click to download the slides (pdf)

Week 2: Cluster and genomic resources

  • Click to download the slides (pdf)
  • Click to download the exercises (pdf)

Week 3: RNA-Seq data processing

  • Click to download the slides (pdf)
  • Click to access the exercises

Week 4: The DolphinNext environment/IGV/UCSC genome browser

  • Click to download the slides (pdf)
  • Click to download the summary slides (pdf)
  • Click to download the DolphinNext slides (pdf)

Week 5: RNA-Seq data processing/analysis using Galaxy and Dolphin

  • Click DolphinNext Quick Start Guide
  • Click to see R scripts(html)

Week 6: RNA-Seq data analysis using R and DEBrowser